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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35651800_35653144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35651800 - 35653144

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATCC

5'SS Class:

major

3'SS Sequence:

GTTGTTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

GTTTTTCTAAGT

Flanking Amino Acid:

LLKSNITKYKNALERRKNSK

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.5

36.3

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

79.5

0.66

0.9

77.2

37.1

Minor 5ss

44.7

-0.6

2.8

60.7

43.8

Minor BPS

54.1

0.21

1.9

76.65

40.1

Associated Gene:

Gene:

CCDC149

Ensembl Gene ID:

ENSAPLG00000010671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037800

35632538 - 35680171

47634

ENSAPLT00000011128

35633938 - 35680171

46234