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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35653218_35654549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35653218 - 35654549

Intron Length:

1332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TAAAAGATGACT

Flanking Amino Acid:

IDIDALCMENRYLQERLKQL

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

40.6

-0.6

2.3

42.7

Associated Gene:

Gene:

CCDC149

Ensembl Gene ID:

ENSAPLG00000010671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037800

35632538 - 35680171

47634

ENSAPLT00000011128

35633938 - 35680171

46234