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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35662251_35671298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35662251 - 35671298

Intron Length:

9048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TAGGCTCTAACT

Flanking Amino Acid:

PSLPPEKRKQANLTQLLNEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

80.6

0.69

0.8

37.3

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

56.6

0.29

1.8

73.56

43.3

Associated Gene:

Gene:

CCDC149

Ensembl Gene ID:

ENSAPLG00000010671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037800

35632538 - 35680171

47634

ENSAPLT00000011128

35633938 - 35680171

46234