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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35715408_35718770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35715408 - 35718770

Intron Length:

3363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTGCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AGTCTTTGAAAA

Flanking Amino Acid:

AFAGLFHLEYLFIEGNKIET

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

67.4

43.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

81.4

0.71

0.8

77.1

37.1

Minor 5ss

40.4

-1.1

3.1

56.3

42.1

Minor BPS

48.8

-0

1.5

58.14

34.3

Associated Gene:

Gene:

LGI2

Ensembl Gene ID:

ENSAPLG00000019636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024902

35706262 - 35723071

16810