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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35746731_35755335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35746731 - 35755335

Intron Length:

8605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

GYKQLLKERKEMFSYLSSGL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

SEPSECS

Ensembl Gene ID:

ENSAPLG00000009962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041841

35741935 - 35766316

24382

ENSAPLT00000010389

35732108 - 35766316

34209