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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3578461_3580618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3578461 - 3580618

Intron Length:

2158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TGGCTCTCACCA

Flanking Amino Acid:

NPIIYCCLNKRFRAGFKRAF

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

72.7

0.56

30.1

Major PPT

88.6

0.87

0.7

81.1

30.9

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

47.2

-0.2

1.8

57.45

41.8

Associated Gene:

Gene:

TACR3

Ensembl Gene ID:

ENSAPLG00000008661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009013

3578151 - 3612853

34703