Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_35796614_35798296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35796614 - 35798296

Intron Length:

1683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TCTTGCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTATTCTAATC

Flanking Amino Acid:

PSLSCTRTSCQADKKQRQKT

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

70.3

40.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.9

0.81

0.8

79.7

32.4

Minor 5ss

38.5

-1.3

3.3

54.8

43.4

Minor BPS

57.4

0.21

1.6

71.08

34.2

Associated Gene:

Gene:

ZCCHC4

Ensembl Gene ID:

ENSAPLG00000009717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010114

35787693 - 35798526

10834