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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3580816_3594889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3580816 - 3594889

Intron Length:

14074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTTC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TATTATTAAACA

Flanking Amino Acid:

YHEQLKAKRKVVKMMIVVVL

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

66.9

39.5

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

93.2

0.97

0.6

92.1

18.5

Minor 5ss

40.3

-1.1

3.5

45.8

Minor BPS

59.8

0.3

1.8

73.39

38.3

Associated Gene:

Gene:

TACR3

Ensembl Gene ID:

ENSAPLG00000008661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009013

3578151 - 3612853

34703