Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36069679 - 36073110

Intron Length:

3432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTCTTTTAATT

Flanking Amino Acid:

GERPQPKRLTREAMRNYLKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.77

0.8

82.3

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

71.4

0.75

1.1

81.54

33.9

Associated Gene:

Gene:

RBPJ

Ensembl Gene ID:

ENSAPLG00000007512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018053

35953926 - 36092637

138712

ENSAPLT00000026258

36058443 - 36092637

34195

ENSAPLT00000017182

35946940 - 36092637

145698

ENSAPLT00000019953

36060052 - 36092637

32586

ENSAPLT00000047343

36015212 - 36092637

77426

ENSAPLT00000007822

35951200 - 36092637

141438

ENSAPLT00000019381

36063131 - 36092637

29507

ENSAPLT00000045640

36059478 - 36092637

33160

ENSAPLT00000018639

35960786 - 36092637

131852

ENSAPLT00000041412