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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36083484_36084978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36083484 - 36084978

Intron Length:

1495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

GTATTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATTTTATAATC

Flanking Amino Acid:

KKKQSLKNADLCIASGTKVA

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

80.3

0.68

0.9

73.9

36.5

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

57.4

0.21

1.5

66.3

32.9

Associated Gene:

Gene:

RBPJ

Ensembl Gene ID:

ENSAPLG00000007512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017182

35946940 - 36092637

145698

ENSAPLT00000019953

36060052 - 36092637

32586

ENSAPLT00000007822

35951200 - 36092637

141438

ENSAPLT00000019381

36063131 - 36092637

29507

ENSAPLT00000047343

36015212 - 36092637

77426

ENSAPLT00000018639

35960786 - 36092637

131852

ENSAPLT00000045640

36059478 - 36092637

33160

ENSAPLT00000018053

35953926 - 36092637

138712

ENSAPLT00000026258

36058443 - 36092637

34195