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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36085464_36091291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36085464 - 36091291

Intron Length:

5828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACAGTTC

5'SS Class:

major

3'SS Sequence:

CTTTCTTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AGTTTTCAAACT

Flanking Amino Acid:

SVTGMALPRLATPCPKEPNK

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.1

60.1

39.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.1

0.61

82.4

26.6

Minor 5ss

39.7

-1.2

3.6

55.2

44.7

Minor BPS

1.9

71.15

39.9

Associated Gene:

Gene:

RBPJ

Ensembl Gene ID:

ENSAPLG00000007512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019953

36060052 - 36092637

32586