Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36092231 - 36092321

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTAT

5'SS Class:

major

3'SS Sequence:

TCCTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ACCCACTTGACT

Flanking Amino Acid:

FGDVEAETMYRCAESMLCVV

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

68.7

38.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

85.7

0.8

83.6

31.5

Minor 5ss

37.4

-1.4

3.5

55.6

48.6

Minor BPS

56.3

0.28

1.6

68.01

42.7

Associated Gene:

Gene:

RBPJ

Ensembl Gene ID:

ENSAPLG00000007512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018053

35953926 - 36092637

138712

ENSAPLT00000026258

36058443 - 36092637

34195

ENSAPLT00000017182

35946940 - 36092637

145698

ENSAPLT00000019953

36060052 - 36092637

32586

ENSAPLT00000047343

36015212 - 36092637

77426

ENSAPLT00000007822

35951200 - 36092637

141438

ENSAPLT00000019381

36063131 - 36092637

29507

ENSAPLT00000045640

36059478 - 36092637

33160

ENSAPLT00000018639

35960786 - 36092637

131852

ENSAPLT00000041412