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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36115306_36117361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36115306 - 36117361

Intron Length:

2056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCATACGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTGTCTTTATTT

Flanking Amino Acid:

AVCKTATYFMGISVSVSTFN

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

67.4

0.39

61.4

39.1

Minor 5ss

39.7

-1.2

3.1

51.1

45.2

Minor BPS

69.5

0.69

1.5

83.25

38.8

Associated Gene:

Gene:

CCKAR

Ensembl Gene ID:

ENSAPLG00000025740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031021

36112267 - 36119311

7045