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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3614587_3659406_F

Intron Information:

Intron Rank:

134850

Intron Class:

major

Intron Phase:

Intron Coordinates:

3614587 - 3659406

Intron Length:

44820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TACTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CTCTCTAAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

81.8

38.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

81.1

0.7

0.8

78.1

34.6

Minor 5ss

38.9

-1.2

2.8

43.3

43.8

Minor BPS

46.4

-0.1

65.4

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019329

3613794 - 3659630

45837