Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_36149471_36156741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36149471 - 36156741

Intron Length:

7271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTGT

5'SS Class:

major

3'SS Sequence:

TTGTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TTCCCTTAAAAA

Flanking Amino Acid:

EPLAYMRKAQRPASEQKELL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

70.9

41.9

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

83.9

0.76

0.9

81.2

36.5

Minor 5ss

36.9

-1.5

3.1

50.4

45.9

Minor BPS

0.09

1.8

65.66

40.9

Associated Gene:

Gene:

TBC1D19

Ensembl Gene ID:

ENSAPLG00000007019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007314

36138481 - 36184329

45849