Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_36181796_36182068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36181796 - 36182068

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGGAA

5'SS Class:

major

3'SS Sequence:

TTTGCTGTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TCTTCTTTATCA

Flanking Amino Acid:

LGYNSLEVLAVLQR*

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

63.8

35.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

68.3

0.41

41.3

Minor 5ss

28.7

-2.4

3.5

34.4

43.8

Minor BPS

71.4

0.67

1.5

78.76

38.3

Associated Gene:

Gene:

TBC1D19

Ensembl Gene ID:

ENSAPLG00000007019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031356

36138481 - 36182082

43602