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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36246831_36253303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36246831 - 36253303

Intron Length:

6473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

TTTTTGTGAAAA

Flanking Amino Acid:

DLWRRWKTSEVHNWTQEDTL

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

80.2

30.6

Major BPS

71.2

0.53

72.3

32.8

Major PPT

78.3

0.64

0.8

70.2

35.8

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

51.2

0.03

2.2

73.17

38.4

Associated Gene:

Gene:

STIM2

Ensembl Gene ID:

ENSAPLG00000006859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028197

36200555 - 36262915

62361

ENSAPLT00000023421

36196936 - 36262915

65980

ENSAPLT00000007144

36231789 - 36262915

31127

ENSAPLT00000034040

36200555 - 36262915

62361