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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36257488_36257701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36257488 - 36257701

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTAATTTTAATG

Flanking Amino Acid:

DEVDHKILEAKKALSELTTC

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

74.5

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.3

0.82

0.7

84.6

30.3

Minor 5ss

37.3

-1.4

3.2

48.7

41.3

Minor BPS

57.5

0.1

1.4

57.11

38.8

Associated Gene:

Gene:

STIM2

Ensembl Gene ID:

ENSAPLG00000006859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007144

36231789 - 36262915

31127

ENSAPLT00000034040

36200555 - 36262915

62361

ENSAPLT00000028197

36200555 - 36262915

62361

ENSAPLT00000023421

36196936 - 36262915

65980