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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36259662_36261431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36259662 - 36261431

Intron Length:

1770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

TTTTCTTTGCCT

Flanking Amino Acid:

RLQAKGSMQTGSIVKPPSTL

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.4

32.4

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

81.6

0.71

0.8

80.5

31.5

Minor 5ss

35.9

-1.6

2.7

43.9

43.8

Minor BPS

53.3

0.19

3.5

90.81

33.2

Associated Gene:

Gene:

STIM2

Ensembl Gene ID:

ENSAPLG00000006859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028197

36200555 - 36262915

62361

ENSAPLT00000023421

36196936 - 36262915

65980

ENSAPLT00000007144

36231789 - 36262915

31127