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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36511529_36558793_F

Intron Information:

Intron Rank:

125570

Intron Class:

major

Intron Phase:

Intron Coordinates:

36511529 - 36558793

Intron Length:

47265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GCCTGAGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

90.8

0.92

0.6

85.1

29.7

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

40.9

-0.6

2.4

56.98

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038972

36510859 - 36559356

48498

ENSAPLT00000021101

36509577 - 36559356

49780