Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_36558959_36559339_F

Intron Information:

Intron Rank:

125573

Intron Class:

major

Intron Phase:

Intron Coordinates:

36558959 - 36559339

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATAGA

5'SS Class:

major

3'SS Sequence:

TTTTTATCAGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.5

40.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.3

0.73

0.9

79.3

32.9

Minor 5ss

33.4

-1.9

42.9

Minor BPS

65.6

0.49

1.5

74.08

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032796

36551360 - 36559534

8175