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Intron Name: Anas_platyrhynchos_platyrhynchos_4_36816645_36828568_R

Intron Information:

Intron Rank:

132030

Intron Class:

major

Intron Phase:

Intron Coordinates:

36816645 - 36828568

Intron Length:

11924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTATCTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

79.3

31.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

88.3

0.86

0.6

84.7

22.9

Minor 5ss

28.2

-2.5

2.8

32.2

42.5

Minor BPS

73.8

0.73

1.2

77.16

32.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045530

36816580 - 36855079

38500