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Intron Name: Anas_platyrhynchos_platyrhynchos_4_37065307_37065710_R


Intron Information:

Intron Rank:
31

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
37065307 - 37065710

Intron Length:
404

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGGAGC

5'SS Class:
major

3'SS Sequence:
GCTCTTTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAT

U12 Branch Point Sequence:
TGATCTGAGACT

Flanking Amino Acid:
EDQRQEGNVCRPFCETLMSV

Intron Amino Acid Position:
1252

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.6
0.58
1.3
68.5
39.3

Major BPS
79
0.72
1
69
38.9

Major PPT
76.9
0.6
0.8
68.8
37.2

Minor 5ss
28
-2.5
2.9
34.9
41.1

Minor BPS
46.1
-0.2
2.3
68.05
43.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37062762 - 37075990
13229