Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_37070246_37070520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37070246 - 37070520

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGTTCC

5'SS Class:

major

3'SS Sequence:

TGTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTGCAT

U12 Branch Point Sequence:

TGTTGCTGCATT

Flanking Amino Acid:

DSSPSSSGEKAFLYKALGTT

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.3

66.7

40.1

Major BPS

47.9

-0.1

1.6

59.3

47.1

Major PPT

83.8

0.76

0.8

77.6

31.1

Minor 5ss

35.5

-1.6

45.1

Minor BPS

47.8

-0

2.3

73.4

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024198

37062762 - 37075990

13229