Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_37206910_37209149_R

Intron Information:

Intron Rank:

153099

Intron Class:

major

Intron Phase:

Intron Coordinates:

37206910 - 37209149

Intron Length:

2240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTCTAT

5'SS Class:

major

3'SS Sequence:

GATTTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTAATGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

67.7

40.1

Major BPS

84.4

0.85

34.5

Major PPT

80.8

0.69

0.9

77.2

41.6

Minor 5ss

44.2

-0.6

3.2

64.1

47.4

Minor BPS

45.3

-0.2

68.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031974

37203387 - 37211020

7634