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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_37510693_37519621_R

Intron Information:

Intron Rank:
135224
Intron Class:
major
Intron Phase:
Intron Coordinates:
37510693 - 37519621
Intron Length:
8929

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAAACATA
5'SS Class:
strong_major
3'SS Sequence:
ACTTTTAAATTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
ATACTTTTAAAT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.8
0.77
0.9
80.4
34.2
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
65
0.34
1
65.1
39.7
Minor 5ss
42.3
-0.8
3
57.2
47.1
Minor BPS
61.7
0.44
1.3
73.8
36.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000020131
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000043275
37503760 - 37519897
16138