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Intron Name: Anas_platyrhynchos_platyrhynchos_4_38574714_38578502_F

Intron Information:

Intron Rank:

128195

Intron Class:

major

Intron Phase:

Intron Coordinates:

38574714 - 38578502

Intron Length:

3789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTGG

5'SS Class:

major

3'SS Sequence:

TTATTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TGTACTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

64.2

42.4

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

87.2

0.84

0.7

81.4

36.1

Minor 5ss

45.8

-0.4

2.5

58.8

45.7

Minor BPS

61.6

0.44

1.6

77.27

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031302

38574557 - 38583940

9384