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Intron Name: Anas_platyrhynchos_platyrhynchos_4_38695199_38695915_F

Intron Information:

Intron Rank:

136874

Intron Class:

major

Intron Phase:

Intron Coordinates:

38695199 - 38695915

Intron Length:

717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AGGATTCTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.9

0.6

85.3

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

47.8

-0.1

1.6

55.52

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044029

38694771 - 38697732

2962