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Intron Name: Anas_platyrhynchos_platyrhynchos_4_38900413_38907071_R

Intron Information:

Intron Rank:

143414

Intron Class:

major

Intron Phase:

Intron Coordinates:

38900413 - 38907071

Intron Length:

6659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTAATAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTGTAATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

81.8

31.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.2

0.43

63.4

40.9

Minor 5ss

36.5

-1.5

2.7

46.6

41.8

Minor BPS

48.3

-0.1

64.78

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021976

38899843 - 38913273

13431