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Intron Name: Anas_platyrhynchos_platyrhynchos_4_38988177_38989118_R

Intron Information:

Intron Rank:

133616

Intron Class:

major

Intron Phase:

Intron Coordinates:

38988177 - 38989118

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

CTTTAAAACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTGTCTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.3

66.6

44.7

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.29

60.5

39.3

Minor 5ss

38.7

-1.3

56.4

40.7

Minor BPS

68.9

0.59

1.4

72.11

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020099

38988099 - 38993336

5238