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Intron Name: Anas_platyrhynchos_platyrhynchos_4_38994720_38995235_R

Intron Information:

Intron Rank:

133623

Intron Class:

major

Intron Phase:

Intron Coordinates:

38994720 - 38995235

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTCTCAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

78.3

36.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

86.9

0.83

0.7

81.8

30.1

Minor 5ss

38.8

-1.3

3.1

40.3

Minor BPS

50.7

0.1

1.9

74.99

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046799

38974956 - 38998268

23313

ENSAPLT00000047427

38992496 - 38998268

5773