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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39237388_39238374_R

Intron Information:

Intron Rank:

131204

Intron Class:

major

Intron Phase:

Intron Coordinates:

39237388 - 39238374

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTCTAT

U12 Branch Point Sequence:

TCCTGCTCTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.8

38.2

Major BPS

47.4

-0.1

1.5

46.4

46.5

Major PPT

100

1.12

0.4

100

Minor 5ss

32.2

-2

3.5

48.1

47.4

Minor BPS

45.1

-0.3

2.2

63.58

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017800

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026721

39237276 - 39243192

5917