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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39304431_39318373_R

Intron Information:

Intron Rank:

138738

Intron Class:

major

Intron Phase:

Intron Coordinates:

39304431 - 39318373

Intron Length:

13943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGCAT

5'SS Class:

major

3'SS Sequence:

TTGTATCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

64.6

40.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

83.2

0.75

0.9

77.5

36.5

Minor 5ss

37.9

-1.4

3.4

55.3

48.9

Minor BPS

65.5

0.57

1.9

85.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034064

39303623 - 39318966

15344