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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39336560_39342963_R

Intron Information:

Intron Rank:

149484

Intron Class:

major

Intron Phase:

Intron Coordinates:

39336560 - 39342963

Intron Length:

6404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTTTGTTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

77.8

0.62

0.8

75.5

34.3

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

56.3

0.28

2.2

80.14

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022046

39335721 - 39344368

8648