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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39336560_39344200_R

Intron Information:

Intron Rank:

149487

Intron Class:

major

Intron Phase:

Intron Coordinates:

39336560 - 39344200

Intron Length:

7641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TGTTTCACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTTTGTTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

77.8

0.62

0.8

75.5

34.3

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

56.3

0.28

2.2

80.14

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023528

39324826 - 39344368

19543