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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39425689_39437748_R

Intron Information:

Intron Rank:

129499

Intron Class:

major

Intron Phase:

Intron Coordinates:

39425689 - 39437748

Intron Length:

12060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATAATATTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

CTTTATTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

64.2

0.32

1.1

59.2

45.5

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

68.6

0.56

1.5

74.77

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048381

39425463 - 39437909

12447