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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39439029_39448803_F

Intron Information:

Intron Rank:

145801

Intron Class:

major

Intron Phase:

Intron Coordinates:

39439029 - 39448803

Intron Length:

9775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATACACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.7

83.2

30.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

78.6

0.64

0.8

73.7

31.4

Minor 5ss

32.4

-2

40.7

45.5

Minor BPS

47.3

-0.1

2.3

71.36

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040666

39437976 - 39449518

11543