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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39517985_39522808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39517985 - 39522808

Intron Length:

4824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GGGCATTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TTTCTGGGCATT

Flanking Amino Acid:

AFEVLENGELERPLHYTENV

Intron Amino Acid Position:

1302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

82.6

29.9

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

70.2

0.45

65.4

45.2

Minor 5ss

30.7

-2.2

3.1

40.9

45.4

Minor BPS

-1.1

2.7

61.15

43.3

Associated Gene:

Gene:

ARAP2

Ensembl Gene ID:

ENSAPLG00000013894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014487

39496004 - 39612808

116805