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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39545148_39547145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39545148 - 39547145

Intron Length:

1998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

ATCATCTGAATG

Flanking Amino Acid:

SIYLRRLQELTISSVMQNGE

Intron Amino Acid Position:

983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

79.4

0.73

80.1

Major PPT

83.3

0.75

0.9

80.2

37.3

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

51.4

-0

1.5

54.88

40.6

Associated Gene:

Gene:

ARAP2

Ensembl Gene ID:

ENSAPLG00000013894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014487

39496004 - 39612808

116805