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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39548092_39550414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39548092 - 39550414

Intron Length:

2323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTTCC

5'SS Class:

major

3'SS Sequence:

CTGCTTGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

CTAAACACAGCT

Flanking Amino Acid:

VHKSDFFLNRGDVFTFEIYL

Intron Amino Acid Position:

882

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

66.7

40.1

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

75.8

0.58

0.9

72.9

37.4

Minor 5ss

39.6

-1.2

44.8

43.3

Minor BPS

39.4

-0.7

56.51

44.8

Associated Gene:

Gene:

ARAP2

Ensembl Gene ID:

ENSAPLG00000013894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014487

39496004 - 39612808

116805