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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39556608_39558713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39556608 - 39558713

Intron Length:

2106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACTA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTCATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTAATTTAAAC

Flanking Amino Acid:

LYKTKEQLNKALCAAVVKQD

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

73.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

62.5

0.28

67.9

31.1

Minor 5ss

35.6

-1.6

3.2

48.3

47.2

Minor BPS

55.3

0.14

1.7

65.31

Associated Gene:

Gene:

ARAP2

Ensembl Gene ID:

ENSAPLG00000013894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014487

39496004 - 39612808

116805