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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39559651_39560488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39559651 - 39560488

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTAA

5'SS Class:

major

3'SS Sequence:

CTTGGATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TACTCTTGGATT

Flanking Amino Acid:

LCVVICKKCAGQHRSLGPRD

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.2

37.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

71.8

0.49

0.9

62.4

43.4

Minor 5ss

-1.8

3.6

45.7

49.5

Minor BPS

58.5

0.35

1.4

72.1

39.4

Associated Gene:

Gene:

ARAP2

Ensembl Gene ID:

ENSAPLG00000013894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014487

39496004 - 39612808

116805