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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39593560_39597003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39593560 - 39597003

Intron Length:

3444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGGTAT

5'SS Class:

major

3'SS Sequence:

TCTTGGTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

GTTATTTTAAGT

Flanking Amino Acid:

AGWLDKLSPQGKRMFQKRWV

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

68.3

39.1

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

77.8

0.63

0.9

71.5

38.4

Minor 5ss

-0.6

3.2

55.1

49.1

Minor BPS

0.42

1.7

76.69

40.1

Associated Gene:

Gene:

ARAP2

Ensembl Gene ID:

ENSAPLG00000013894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014487

39496004 - 39612808

116805