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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39640159_39640704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39640159 - 39640704

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTTTTAATA

Flanking Amino Acid:

VSFELNEHLESFVVIRLSFL

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

71.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.81

0.8

81.8

33.6

Minor 5ss

37.1

-1.5

3.3

49.8

46.8

Minor BPS

0.59

1.2

69.67

37.9

Associated Gene:

Gene:

DTHD1

Ensembl Gene ID:

ENSAPLG00000014119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036404

39630869 - 39643872

13004

ENSAPLT00000014698

39630869 - 39650553

19685