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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39772987_39780559_F

Intron Information:

Intron Rank:

126555

Intron Class:

major

Intron Phase:

Intron Coordinates:

39772987 - 39780559

Intron Length:

7573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACGG

5'SS Class:

strong_major

3'SS Sequence:

CTGGCTTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

CTGGCTTCATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

62.5

43.9

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

68.4

0.41

66.6

39.4

Minor 5ss

25.9

-2.8

2.9

30.2

42.8

Minor BPS

45.8

-0.3

1.9

54.62

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028509

39768330 - 39780762

12433