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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39785611_39805148_R

Intron Information:

Intron Rank:

142049

Intron Class:

major

Intron Phase:

Intron Coordinates:

39785611 - 39805148

Intron Length:

19538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

AGAATATTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

73.9

0.59

30.2

Major PPT

79.2

0.66

0.9

69.7

45.4

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

42.5

-0.4

1.8

55.35

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028688

39784827 - 39805444

20618