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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39834840_39834960_R

Intron Information:

Intron Rank:

149699

Intron Class:

major

Intron Phase:

Intron Coordinates:

39834840 - 39834960

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGTG

5'SS Class:

major

3'SS Sequence:

TCTTATTTGTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATATTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

69.9

41.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

68.7

0.42

1.2

75.2

38.5

Minor 5ss

39.6

-1.2

3.5

55.7

48.5

Minor BPS

59.1

0.26

1.8

72.03

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037353

39834369 - 39858015

23647