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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39835073_39857891_R

Intron Information:

Intron Rank:

149700

Intron Class:

major

Intron Phase:

Intron Coordinates:

39835073 - 39857891

Intron Length:

22819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ATGACCTTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

70.7

0.47

0.9

38.3

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

59.8

0.39

1.7

74.12

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037353

39834369 - 39858015

23647