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Intron Name: Anas_platyrhynchos_platyrhynchos_4_39933307_39933586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39933307 - 39933586

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGTTC

5'SS Class:

major

3'SS Sequence:

TTTTAATCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTCTTTTAATC

Flanking Amino Acid:

HSQAKRYLSSAIEDELDFAL

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

36.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.7

0.69

0.8

78.3

34.8

Minor 5ss

40.8

-1

3.4

55.1

44.8

Minor BPS

67.9

0.54

1.2

70.66

35.2

Associated Gene:

Gene:

NWD2

Ensembl Gene ID:

ENSAPLG00000004933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005085

39883790 - 39939744

55955