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Intron Name: Anas_platyrhynchos_platyrhynchos_4_40007979_40011429_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40007979 - 40011429

Intron Length:

3451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTTAATCCT

5'SS Class:

weak_major

3'SS Sequence:

AGGCAATGGAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TATTCCATTACA

Flanking Amino Acid:

APGGRRRAGTFVQVLESRGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.1

0.1

1.2

54.8

42.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

39.8

-0.5

1.7

31.3

40.3

Minor 5ss

34.8

-1.7

49.8

39.9

Minor BPS

63.2

0.41

1.9

77.87

Associated Gene:

Gene:

RELL1

Ensembl Gene ID:

ENSAPLG00000008800

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009152

40001528 - 40011507

9980